Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDN81006.1 | SDN81028.1 | SAMN04487957_10226 | SAMN04487957_10227 | Inorganic phosphate transporter, PiT family. | Hypothetical protein. | 0.989 |
SDN81006.1 | SDN81061.1 | SAMN04487957_10226 | SAMN04487957_10228 | Inorganic phosphate transporter, PiT family. | CYTH domain-containing protein. | 0.677 |
SDN81006.1 | SDN81101.1 | SAMN04487957_10226 | SAMN04487957_10229 | Inorganic phosphate transporter, PiT family. | Voltage-gated potassium channel. | 0.661 |
SDN81006.1 | argA | SAMN04487957_10226 | SAMN04487957_10225 | Inorganic phosphate transporter, PiT family. | N-acetylglutamate synthase; Belongs to the acetyltransferase family. ArgA subfamily. | 0.550 |
SDN81028.1 | SDN81006.1 | SAMN04487957_10227 | SAMN04487957_10226 | Hypothetical protein. | Inorganic phosphate transporter, PiT family. | 0.989 |
SDN81028.1 | SDN81061.1 | SAMN04487957_10227 | SAMN04487957_10228 | Hypothetical protein. | CYTH domain-containing protein. | 0.617 |
SDN81028.1 | SDN81101.1 | SAMN04487957_10227 | SAMN04487957_10229 | Hypothetical protein. | Voltage-gated potassium channel. | 0.721 |
SDN81028.1 | SDO59625.1 | SAMN04487957_10227 | SAMN04487957_108115 | Hypothetical protein. | Hemerythrin-like domain-containing protein. | 0.452 |
SDN81028.1 | argA | SAMN04487957_10227 | SAMN04487957_10225 | Hypothetical protein. | N-acetylglutamate synthase; Belongs to the acetyltransferase family. ArgA subfamily. | 0.631 |
SDN81028.1 | gmk | SAMN04487957_10227 | SAMN04487957_10671 | Hypothetical protein. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.527 |
SDN81028.1 | rnpA | SAMN04487957_10227 | SAMN04487957_1068 | Hypothetical protein. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.550 |
SDN81028.1 | rpmB | SAMN04487957_10227 | SAMN04487957_102145 | Hypothetical protein. | LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family. | 0.585 |
SDN81061.1 | SDN81006.1 | SAMN04487957_10228 | SAMN04487957_10226 | CYTH domain-containing protein. | Inorganic phosphate transporter, PiT family. | 0.677 |
SDN81061.1 | SDN81028.1 | SAMN04487957_10228 | SAMN04487957_10227 | CYTH domain-containing protein. | Hypothetical protein. | 0.617 |
SDN81061.1 | SDN81101.1 | SAMN04487957_10228 | SAMN04487957_10229 | CYTH domain-containing protein. | Voltage-gated potassium channel. | 0.823 |
SDN81061.1 | argA | SAMN04487957_10228 | SAMN04487957_10225 | CYTH domain-containing protein. | N-acetylglutamate synthase; Belongs to the acetyltransferase family. ArgA subfamily. | 0.401 |
SDN81101.1 | SDN81006.1 | SAMN04487957_10229 | SAMN04487957_10226 | Voltage-gated potassium channel. | Inorganic phosphate transporter, PiT family. | 0.661 |
SDN81101.1 | SDN81028.1 | SAMN04487957_10229 | SAMN04487957_10227 | Voltage-gated potassium channel. | Hypothetical protein. | 0.721 |
SDN81101.1 | SDN81061.1 | SAMN04487957_10229 | SAMN04487957_10228 | Voltage-gated potassium channel. | CYTH domain-containing protein. | 0.823 |
SDN81101.1 | argA | SAMN04487957_10229 | SAMN04487957_10225 | Voltage-gated potassium channel. | N-acetylglutamate synthase; Belongs to the acetyltransferase family. ArgA subfamily. | 0.413 |
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