STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN95115.1Phosphoglycerol transferase. (588 aa)    
Predicted Functional Partners:
SDN88856.1
Flagellar protein FlhE.
  
     0.755
SDN88166.1
Hook-length control protein FliK.
  
     0.636
SDO90212.1
Hypothetical protein.
  
     0.605
SDN93723.1
VanZ like family protein.
  
    0.597
SDN88008.1
Flagella synthesis protein FlgN.
  
     0.587
SDO63707.1
AAA ATPase domain-containing protein.
  
     0.585
SDN56671.1
Uncharacterized membrane protein.
  
     0.578
SDN58837.1
Hypothetical protein.
  
     0.562
SDO35503.1
Glycerophosphoryl diester phosphodiesterase.
 
   
 0.555
SDN86258.1
HD-GYP domain, c-di-GMP phosphodiesterase class II (or its inactivated variant).
  
     0.535
Your Current Organism:
Halomonas shengliensis
NCBI taxonomy Id: 419597
Other names: CGMCC 1.6444, H. shengliensis, Halomonas shengliensis Wang et al. 2007, LMG 23897, LMG:23897, strain SL014B-85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.