Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDO08849.1 | SDO08881.1 | SAMN04487957_103289 | SAMN04487957_103290 | 16S rRNA pseudouridine516 synthase; Belongs to the pseudouridine synthase RsuA family. | Carbon-nitrogen hydrolase. | 0.865 |
SDO08849.1 | SDO08911.1 | SAMN04487957_103289 | SAMN04487957_103291 | 16S rRNA pseudouridine516 synthase; Belongs to the pseudouridine synthase RsuA family. | Putative transposase. | 0.489 |
SDO08849.1 | SDO08942.1 | SAMN04487957_103289 | SAMN04487957_103292 | 16S rRNA pseudouridine516 synthase; Belongs to the pseudouridine synthase RsuA family. | Chloramphenicol-sensitive protein RarD. | 0.640 |
SDO08881.1 | SDO08849.1 | SAMN04487957_103290 | SAMN04487957_103289 | Carbon-nitrogen hydrolase. | 16S rRNA pseudouridine516 synthase; Belongs to the pseudouridine synthase RsuA family. | 0.865 |
SDO08881.1 | SDO08911.1 | SAMN04487957_103290 | SAMN04487957_103291 | Carbon-nitrogen hydrolase. | Putative transposase. | 0.489 |
SDO08881.1 | SDO08942.1 | SAMN04487957_103290 | SAMN04487957_103292 | Carbon-nitrogen hydrolase. | Chloramphenicol-sensitive protein RarD. | 0.640 |
SDO08911.1 | SDO08849.1 | SAMN04487957_103291 | SAMN04487957_103289 | Putative transposase. | 16S rRNA pseudouridine516 synthase; Belongs to the pseudouridine synthase RsuA family. | 0.489 |
SDO08911.1 | SDO08881.1 | SAMN04487957_103291 | SAMN04487957_103290 | Putative transposase. | Carbon-nitrogen hydrolase. | 0.489 |
SDO08911.1 | SDO08942.1 | SAMN04487957_103291 | SAMN04487957_103292 | Putative transposase. | Chloramphenicol-sensitive protein RarD. | 0.516 |
SDO08911.1 | SDO10916.1 | SAMN04487957_103291 | SAMN04487957_103372 | Putative transposase. | Putative transposase. | 0.632 |
SDO08942.1 | SDO08849.1 | SAMN04487957_103292 | SAMN04487957_103289 | Chloramphenicol-sensitive protein RarD. | 16S rRNA pseudouridine516 synthase; Belongs to the pseudouridine synthase RsuA family. | 0.640 |
SDO08942.1 | SDO08881.1 | SAMN04487957_103292 | SAMN04487957_103290 | Chloramphenicol-sensitive protein RarD. | Carbon-nitrogen hydrolase. | 0.640 |
SDO08942.1 | SDO08911.1 | SAMN04487957_103292 | SAMN04487957_103291 | Chloramphenicol-sensitive protein RarD. | Putative transposase. | 0.516 |
SDO10916.1 | SDO08911.1 | SAMN04487957_103372 | SAMN04487957_103291 | Putative transposase. | Putative transposase. | 0.632 |