Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDO02004.1 | SDO02226.1 | SAMN04487957_10373 | SAMN04487957_10381 | Transposase. | Mercuric ion transport protein. | 0.441 |
SDO02119.1 | SDO02226.1 | SAMN04487957_10377 | SAMN04487957_10381 | Transposase. | Mercuric ion transport protein. | 0.498 |
SDO02148.1 | SDO02201.1 | SAMN04487957_10378 | SAMN04487957_10380 | Mercuric ion transport protein. | Mercuric ion transport protein. | 0.940 |
SDO02148.1 | SDO02226.1 | SAMN04487957_10378 | SAMN04487957_10381 | Mercuric ion transport protein. | Mercuric ion transport protein. | 0.898 |
SDO02148.1 | SDO02293.1 | SAMN04487957_10378 | SAMN04487957_10383 | Mercuric ion transport protein. | Hypothetical protein. | 0.401 |
SDO02148.1 | merA | SAMN04487957_10378 | SAMN04487957_10382 | Mercuric ion transport protein. | Mercuric reductase; Resistance to Hg(2+) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0). Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | 0.901 |
SDO02148.1 | merP | SAMN04487957_10378 | SAMN04487957_10379 | Mercuric ion transport protein. | Mercuric ion binding protein; Involved in mercury resistance. Acts as a mercury scavenger that specifically binds to a mercuric ion in the periplasm and probably passes it to the cytoplasmic mercuric reductase MerA via the mercuric transport protein MerT. | 0.966 |
SDO02201.1 | SDO02148.1 | SAMN04487957_10380 | SAMN04487957_10378 | Mercuric ion transport protein. | Mercuric ion transport protein. | 0.940 |
SDO02201.1 | SDO02226.1 | SAMN04487957_10380 | SAMN04487957_10381 | Mercuric ion transport protein. | Mercuric ion transport protein. | 0.610 |
SDO02201.1 | SDO02293.1 | SAMN04487957_10380 | SAMN04487957_10383 | Mercuric ion transport protein. | Hypothetical protein. | 0.415 |
SDO02201.1 | SDO03413.1 | SAMN04487957_10380 | SAMN04487957_103116 | Mercuric ion transport protein. | Hypothetical protein. | 0.415 |
SDO02201.1 | merA | SAMN04487957_10380 | SAMN04487957_10382 | Mercuric ion transport protein. | Mercuric reductase; Resistance to Hg(2+) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0). Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | 0.895 |
SDO02201.1 | merP | SAMN04487957_10380 | SAMN04487957_10379 | Mercuric ion transport protein. | Mercuric ion binding protein; Involved in mercury resistance. Acts as a mercury scavenger that specifically binds to a mercuric ion in the periplasm and probably passes it to the cytoplasmic mercuric reductase MerA via the mercuric transport protein MerT. | 0.934 |
SDO02226.1 | SDO02004.1 | SAMN04487957_10381 | SAMN04487957_10373 | Mercuric ion transport protein. | Transposase. | 0.441 |
SDO02226.1 | SDO02119.1 | SAMN04487957_10381 | SAMN04487957_10377 | Mercuric ion transport protein. | Transposase. | 0.498 |
SDO02226.1 | SDO02148.1 | SAMN04487957_10381 | SAMN04487957_10378 | Mercuric ion transport protein. | Mercuric ion transport protein. | 0.898 |
SDO02226.1 | SDO02201.1 | SAMN04487957_10381 | SAMN04487957_10380 | Mercuric ion transport protein. | Mercuric ion transport protein. | 0.610 |
SDO02226.1 | SDO02293.1 | SAMN04487957_10381 | SAMN04487957_10383 | Mercuric ion transport protein. | Hypothetical protein. | 0.571 |
SDO02226.1 | SDO03351.1 | SAMN04487957_10381 | SAMN04487957_103114 | Mercuric ion transport protein. | Protein of unknown function. | 0.519 |
SDO02226.1 | SDO03413.1 | SAMN04487957_10381 | SAMN04487957_103116 | Mercuric ion transport protein. | Hypothetical protein. | 0.526 |
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