STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO14004.1Hypothetical protein. (172 aa)    
Predicted Functional Partners:
SDO14056.1
Putative solute:sodium symporter small subunit.
 
     0.877
SDO14030.1
Cation/acetate symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
    0.868
SDO13971.1
PAS domain S-box-containing protein.
       0.757
SDO93444.1
DNA polymerase-3 subunit epsilon.
 
     0.654
SDO07381.1
Uncharacterized conserved protein YtfP, gamma-glutamylcyclotransferase (GGCT)/AIG2-like family.
  
     0.590
SDO90212.1
Hypothetical protein.
  
     0.487
SDO93556.1
CBS domain-containing protein.
 
     0.486
SDN67653.1
Hypothetical protein.
  
     0.440
Your Current Organism:
Halomonas shengliensis
NCBI taxonomy Id: 419597
Other names: CGMCC 1.6444, H. shengliensis, Halomonas shengliensis Wang et al. 2007, LMG 23897, LMG:23897, strain SL014B-85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.