STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO14030.1Cation/acetate symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (598 aa)    
Predicted Functional Partners:
SDO14056.1
Putative solute:sodium symporter small subunit.
 
    0.973
SDO93556.1
CBS domain-containing protein.
 
    0.899
SDO16536.1
CBS domain-containing protein.
 
    0.897
SDO14079.1
CBS domain-containing protein.
 
    0.874
SDO14004.1
Hypothetical protein.
 
    0.868
SDO14108.1
DNA polymerase-3 subunit epsilon.
 
    0.804
SDO08460.1
propionyl-CoA synthetase.
  
  
 0.680
acsA
acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.674
SDO13971.1
PAS domain S-box-containing protein.
  
  
 0.668
SDO30910.1
acetyl-CoA synthetase.
  
  
 0.668
Your Current Organism:
Halomonas shengliensis
NCBI taxonomy Id: 419597
Other names: CGMCC 1.6444, H. shengliensis, Halomonas shengliensis Wang et al. 2007, LMG 23897, LMG:23897, strain SL014B-85
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