Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDN62942.1 | SDO22585.1 | SAMN04487957_101198 | SAMN04487957_104312 | Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | Sulfate transport system permease protein; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.551 |
SDN62942.1 | cysA | SAMN04487957_101198 | SAMN04487957_104310 | Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | Sulfate transport system ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. | 0.927 |
SDO04568.1 | SDO07282.1 | SAMN04487957_103150 | SAMN04487957_103235 | Flavodoxin. | Sulfite reductase (NADPH) hemoprotein beta-component. | 0.993 |
SDO04568.1 | SDO22557.1 | SAMN04487957_103150 | SAMN04487957_104311 | Flavodoxin. | Sulfate transport system permease protein. | 0.870 |
SDO04568.1 | SDO22585.1 | SAMN04487957_103150 | SAMN04487957_104312 | Flavodoxin. | Sulfate transport system permease protein; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.871 |
SDO04568.1 | SDO22612.1 | SAMN04487957_103150 | SAMN04487957_104313 | Flavodoxin. | Sulfate transport system substrate-binding protein. | 0.937 |
SDO04568.1 | cysA | SAMN04487957_103150 | SAMN04487957_104310 | Flavodoxin. | Sulfate transport system ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. | 0.930 |
SDO04568.1 | cysC | SAMN04487957_103150 | SAMN04487957_1097 | Flavodoxin. | Bifunctional enzyme CysN/CysC; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.982 |
SDO04568.1 | cysD | SAMN04487957_103150 | SAMN04487957_104231 | Flavodoxin. | Sulfate adenylyltransferase subunit 2. | 0.872 |
SDO04568.1 | cysD-2 | SAMN04487957_103150 | SAMN04487957_1096 | Flavodoxin. | Sulfate adenylyltransferase subunit 2. | 0.872 |
SDO04568.1 | cysN | SAMN04487957_103150 | SAMN04487957_104232 | Flavodoxin. | Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.951 |
SDO07282.1 | SDO04568.1 | SAMN04487957_103235 | SAMN04487957_103150 | Sulfite reductase (NADPH) hemoprotein beta-component. | Flavodoxin. | 0.993 |
SDO07282.1 | SDO22557.1 | SAMN04487957_103235 | SAMN04487957_104311 | Sulfite reductase (NADPH) hemoprotein beta-component. | Sulfate transport system permease protein. | 0.895 |
SDO07282.1 | SDO22585.1 | SAMN04487957_103235 | SAMN04487957_104312 | Sulfite reductase (NADPH) hemoprotein beta-component. | Sulfate transport system permease protein; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.765 |
SDO07282.1 | SDO22612.1 | SAMN04487957_103235 | SAMN04487957_104313 | Sulfite reductase (NADPH) hemoprotein beta-component. | Sulfate transport system substrate-binding protein. | 0.902 |
SDO07282.1 | cysA | SAMN04487957_103235 | SAMN04487957_104310 | Sulfite reductase (NADPH) hemoprotein beta-component. | Sulfate transport system ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. | 0.953 |
SDO07282.1 | cysC | SAMN04487957_103235 | SAMN04487957_1097 | Sulfite reductase (NADPH) hemoprotein beta-component. | Bifunctional enzyme CysN/CysC; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.989 |
SDO07282.1 | cysD | SAMN04487957_103235 | SAMN04487957_104231 | Sulfite reductase (NADPH) hemoprotein beta-component. | Sulfate adenylyltransferase subunit 2. | 0.868 |
SDO07282.1 | cysD-2 | SAMN04487957_103235 | SAMN04487957_1096 | Sulfite reductase (NADPH) hemoprotein beta-component. | Sulfate adenylyltransferase subunit 2. | 0.868 |
SDO07282.1 | cysN | SAMN04487957_103235 | SAMN04487957_104232 | Sulfite reductase (NADPH) hemoprotein beta-component. | Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.960 |
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