STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO30969.1Acyl-CoA dehydrogenase. (603 aa)    
Predicted Functional Partners:
SDO90313.1
Short chain enoyl-CoA hydratase; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.933
SDO68952.1
methylglutaconyl-CoA hydratase.
  
  0.808
SDN71619.1
fatty-acyl-CoA synthase.
 
 
  0.780
SDO77478.1
Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone.
 
 
 0.706
SDO30910.1
acetyl-CoA synthetase.
  
 
  0.697
SDO36585.1
Electron transfer flavoprotein domain-containing protein.
 
   0.685
SDO30167.1
Long-chain acyl-CoA synthetase.
 
 
  0.680
SDO36559.1
Electron transfer flavoprotein beta subunit.
 
 
 0.667
SDO77512.1
Electron transfer flavoprotein beta subunit.
 
 
 0.667
SDO66377.1
Electron transfer flavoprotein FAD-binding domain-containing protein.
   0.652
Your Current Organism:
Halomonas shengliensis
NCBI taxonomy Id: 419597
Other names: CGMCC 1.6444, H. shengliensis, Halomonas shengliensis Wang et al. 2007, LMG 23897, LMG:23897, strain SL014B-85
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