Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDO01814.1 | SDO02054.1 | SAMN04487957_10366 | SAMN04487957_10375 | Hypothetical protein. | Cu+-exporting ATPase. | 0.577 |
SDO01814.1 | SDO31693.1 | SAMN04487957_10366 | SAMN04487957_105153 | Hypothetical protein. | Cd2+/Zn2+-exporting ATPase. | 0.575 |
SDO02054.1 | SDO01814.1 | SAMN04487957_10375 | SAMN04487957_10366 | Cu+-exporting ATPase. | Hypothetical protein. | 0.577 |
SDO02054.1 | SDO31355.1 | SAMN04487957_10375 | SAMN04487957_105141 | Cu+-exporting ATPase. | Hypothetical protein. | 0.577 |
SDO02054.1 | SDO31693.1 | SAMN04487957_10375 | SAMN04487957_105153 | Cu+-exporting ATPase. | Cd2+/Zn2+-exporting ATPase. | 0.657 |
SDO02054.1 | merP | SAMN04487957_10375 | SAMN04487957_10379 | Cu+-exporting ATPase. | Mercuric ion binding protein; Involved in mercury resistance. Acts as a mercury scavenger that specifically binds to a mercuric ion in the periplasm and probably passes it to the cytoplasmic mercuric reductase MerA via the mercuric transport protein MerT. | 0.656 |
SDO31355.1 | SDO02054.1 | SAMN04487957_105141 | SAMN04487957_10375 | Hypothetical protein. | Cu+-exporting ATPase. | 0.577 |
SDO31355.1 | SDO31693.1 | SAMN04487957_105141 | SAMN04487957_105153 | Hypothetical protein. | Cd2+/Zn2+-exporting ATPase. | 0.575 |
SDO31662.1 | SDO31693.1 | SAMN04487957_105152 | SAMN04487957_105153 | DNA-binding transcriptional regulator, MerR family. | Cd2+/Zn2+-exporting ATPase. | 0.615 |
SDO31693.1 | SDO01814.1 | SAMN04487957_105153 | SAMN04487957_10366 | Cd2+/Zn2+-exporting ATPase. | Hypothetical protein. | 0.575 |
SDO31693.1 | SDO02054.1 | SAMN04487957_105153 | SAMN04487957_10375 | Cd2+/Zn2+-exporting ATPase. | Cu+-exporting ATPase. | 0.657 |
SDO31693.1 | SDO31355.1 | SAMN04487957_105153 | SAMN04487957_105141 | Cd2+/Zn2+-exporting ATPase. | Hypothetical protein. | 0.575 |
SDO31693.1 | SDO31662.1 | SAMN04487957_105153 | SAMN04487957_105152 | Cd2+/Zn2+-exporting ATPase. | DNA-binding transcriptional regulator, MerR family. | 0.615 |
SDO31693.1 | SDO31757.1 | SAMN04487957_105153 | SAMN04487957_105155 | Cd2+/Zn2+-exporting ATPase. | Adenosylcobinamide amidohydrolase. | 0.440 |
SDO31693.1 | SDO31814.1 | SAMN04487957_105153 | SAMN04487957_105157 | Cd2+/Zn2+-exporting ATPase. | L-threonine O-3-phosphate decarboxylase. | 0.440 |
SDO31693.1 | SDO31844.1 | SAMN04487957_105153 | SAMN04487957_105158 | Cd2+/Zn2+-exporting ATPase. | Adenosylcobinamide kinase; Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate. | 0.438 |
SDO31693.1 | cobD | SAMN04487957_105153 | SAMN04487957_105156 | Cd2+/Zn2+-exporting ATPase. | Adenosylcobinamide-phosphate synthase; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. | 0.438 |
SDO31693.1 | cobT | SAMN04487957_105153 | SAMN04487957_105154 | Cd2+/Zn2+-exporting ATPase. | Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). | 0.438 |
SDO31693.1 | merP | SAMN04487957_105153 | SAMN04487957_10379 | Cd2+/Zn2+-exporting ATPase. | Mercuric ion binding protein; Involved in mercury resistance. Acts as a mercury scavenger that specifically binds to a mercuric ion in the periplasm and probably passes it to the cytoplasmic mercuric reductase MerA via the mercuric transport protein MerT. | 0.602 |
SDO31757.1 | SDO31693.1 | SAMN04487957_105155 | SAMN04487957_105153 | Adenosylcobinamide amidohydrolase. | Cd2+/Zn2+-exporting ATPase. | 0.440 |
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