Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDN58837.1 | SDN95115.1 | SAMN04487957_10182 | SAMN04487957_102485 | Hypothetical protein. | Phosphoglycerol transferase. | 0.562 |
SDN58837.1 | SDO35503.1 | SAMN04487957_10182 | SAMN04487957_105278 | Hypothetical protein. | Glycerophosphoryl diester phosphodiesterase. | 0.468 |
SDN93398.1 | SDO35503.1 | SAMN04487957_102429 | SAMN04487957_105278 | Lysophospholipase, alpha-beta hydrolase superfamily. | Glycerophosphoryl diester phosphodiesterase. | 0.571 |
SDN93398.1 | SDO88254.1 | SAMN04487957_102429 | SAMN04487957_11460 | Lysophospholipase, alpha-beta hydrolase superfamily. | Glycerophosphoryl diester phosphodiesterase. | 0.488 |
SDN93398.1 | glpK | SAMN04487957_102429 | SAMN04487957_11139 | Lysophospholipase, alpha-beta hydrolase superfamily. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.478 |
SDN95115.1 | SDN58837.1 | SAMN04487957_102485 | SAMN04487957_10182 | Phosphoglycerol transferase. | Hypothetical protein. | 0.562 |
SDN95115.1 | SDO35503.1 | SAMN04487957_102485 | SAMN04487957_105278 | Phosphoglycerol transferase. | Glycerophosphoryl diester phosphodiesterase. | 0.555 |
SDO17647.1 | SDO35503.1 | SAMN04487957_104143 | SAMN04487957_105278 | Hypothetical protein. | Glycerophosphoryl diester phosphodiesterase. | 0.510 |
SDO17647.1 | SDO88254.1 | SAMN04487957_104143 | SAMN04487957_11460 | Hypothetical protein. | Glycerophosphoryl diester phosphodiesterase. | 0.510 |
SDO35503.1 | SDN58837.1 | SAMN04487957_105278 | SAMN04487957_10182 | Glycerophosphoryl diester phosphodiesterase. | Hypothetical protein. | 0.468 |
SDO35503.1 | SDN93398.1 | SAMN04487957_105278 | SAMN04487957_102429 | Glycerophosphoryl diester phosphodiesterase. | Lysophospholipase, alpha-beta hydrolase superfamily. | 0.571 |
SDO35503.1 | SDN95115.1 | SAMN04487957_105278 | SAMN04487957_102485 | Glycerophosphoryl diester phosphodiesterase. | Phosphoglycerol transferase. | 0.555 |
SDO35503.1 | SDO17647.1 | SAMN04487957_105278 | SAMN04487957_104143 | Glycerophosphoryl diester phosphodiesterase. | Hypothetical protein. | 0.510 |
SDO35503.1 | SDO35531.1 | SAMN04487957_105278 | SAMN04487957_105279 | Glycerophosphoryl diester phosphodiesterase. | Regulator of ribonuclease activity A; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions. | 0.738 |
SDO35503.1 | SDO64125.1 | SAMN04487957_105278 | SAMN04487957_10941 | Glycerophosphoryl diester phosphodiesterase. | Aconitase; Belongs to the aconitase/IPM isomerase family. | 0.473 |
SDO35503.1 | SDO75682.1 | SAMN04487957_105278 | SAMN04487957_11137 | Glycerophosphoryl diester phosphodiesterase. | Homodimeric glycerol 3-phosphate dehydrogenase (quinone); Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.700 |
SDO35503.1 | SDO76308.1 | SAMN04487957_105278 | SAMN04487957_11158 | Glycerophosphoryl diester phosphodiesterase. | Glycerol-3-phosphate dehydrogenase. | 0.479 |
SDO35503.1 | SDO88254.1 | SAMN04487957_105278 | SAMN04487957_11460 | Glycerophosphoryl diester phosphodiesterase. | Glycerophosphoryl diester phosphodiesterase. | 0.944 |
SDO35503.1 | glpK | SAMN04487957_105278 | SAMN04487957_11139 | Glycerophosphoryl diester phosphodiesterase. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.740 |
SDO35531.1 | SDO35503.1 | SAMN04487957_105279 | SAMN04487957_105278 | Regulator of ribonuclease activity A; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions. | Glycerophosphoryl diester phosphodiesterase. | 0.738 |
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