STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO35771.1Manganese/zinc/iron transport system ATP-binding protein. (264 aa)    
Predicted Functional Partners:
SDO35738.1
Manganese/zinc/iron transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.998
SDO35804.1
ABC 3 transport family protein.
 
 0.995
SDO35832.1
Manganese/zinc/iron transport system permease protein.
 
 0.995
SDN90035.1
Zinc/manganese transport system permease protein.
 
 0.973
SDN90062.1
Zinc/manganese transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.968
SDO31757.1
Adenosylcobinamide amidohydrolase.
 
   
  0.645
SDO35712.1
Uncharacterized iron-regulated protein.
       0.522
SDN62942.1
Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
     
 0.433
fur
Fur family transcriptional regulator, zinc uptake regulator; Belongs to the Fur family.
 
  
 0.432
SDN86185.1
CheB methylesterase.
     
 0.427
Your Current Organism:
Halomonas shengliensis
NCBI taxonomy Id: 419597
Other names: CGMCC 1.6444, H. shengliensis, Halomonas shengliensis Wang et al. 2007, LMG 23897, LMG:23897, strain SL014B-85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.