STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO36001.1Uncharacterized conserved protein. (157 aa)    
Predicted Functional Partners:
SDO35968.1
Acetyltransferase (GNAT) domain-containing protein.
       0.693
SDO35932.1
Glutamate synthase domain-containing protein 2; Belongs to the glutamate synthase family.
       0.689
SDN82313.1
Glutamate synthase (NADPH) large subunit.
     
 0.636
SDO21287.1
Hypothetical protein.
  
     0.589
SDN92397.1
Cytochrome C oxidase, cbb3-type, subunit III.
     
 0.587
SDO16273.1
S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
 
  
 0.522
SDO80522.1
Aryl-alcohol dehydrogenase.
    
 0.460
SDO16309.1
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
    
  0.449
SDO35896.1
Cation diffusion facilitator family transporter.
       0.446
Your Current Organism:
Halomonas shengliensis
NCBI taxonomy Id: 419597
Other names: CGMCC 1.6444, H. shengliensis, Halomonas shengliensis Wang et al. 2007, LMG 23897, LMG:23897, strain SL014B-85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.