STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO29381.1Hypothetical protein. (117 aa)    
Predicted Functional Partners:
SDO29344.1
Peptidase M15.
       0.773
SDO29433.1
5-methylcytosine-specific restriction enzyme A.
       0.470
SDO29412.1
Holin of 3TMs, for gene-transfer release.
       0.463
SDO29283.1
Crossover junction endodeoxyribonuclease RusA.
       0.418
SDO29308.1
Hypothetical protein.
       0.418
SDO29143.1
Hypothetical protein.
       0.409
SDO29181.1
Hypothetical protein.
       0.409
SDO29223.1
Hypothetical protein.
       0.409
SDO29255.1
Hypothetical protein.
       0.409
Your Current Organism:
Halomonas shengliensis
NCBI taxonomy Id: 419597
Other names: CGMCC 1.6444, H. shengliensis, Halomonas shengliensis Wang et al. 2007, LMG 23897, LMG:23897, strain SL014B-85
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.