STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO42308.1Cu-processing system permease protein. (274 aa)    
Predicted Functional Partners:
SDO42373.1
Nitrous oxidase accessory protein.
 
 
 0.998
SDO42342.1
Cu-processing system ATP-binding protein.
 
 0.997
SDO42276.1
Copper chaperone NosL.
 
 
 0.996
nosZ
Nitrous oxide reductase apoprotein; Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide; In the C-terminal section; belongs to the cytochrome c oxidase subunit 2 family.
 
 
 0.996
SDO42437.1
NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator.
 
  
 0.988
SDN72651.1
Ribosome-dependent ATPase.
  
 0.929
SDO64199.1
ABC-2 type transport system ATP-binding protein.
  
 0.915
SDO87817.1
ABC-2 type transport system ATP-binding protein.
  
 0.915
SDN92114.1
Nitric oxide reductase subunit B; Belongs to the heme-copper respiratory oxidase family.
  
  
 0.823
SDN92044.1
Nitric oxide reductase NorD protein.
  
    0.771
Your Current Organism:
Halomonas shengliensis
NCBI taxonomy Id: 419597
Other names: CGMCC 1.6444, H. shengliensis, Halomonas shengliensis Wang et al. 2007, LMG 23897, LMG:23897, strain SL014B-85
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