Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDO29896.1 | SDO50864.1 | SAMN04487957_10593 | SAMN04487957_10770 | Hypothetical protein. | Hypothetical protein. | 0.415 |
SDO50864.1 | SDO29896.1 | SAMN04487957_10770 | SAMN04487957_10593 | Hypothetical protein. | Hypothetical protein. | 0.415 |
SDO50864.1 | SDO50947.1 | SAMN04487957_10770 | SAMN04487957_10771 | Hypothetical protein. | OmpA-like transmembrane domain-containing protein; Belongs to the outer membrane OOP (TC 1.B.6) superfamily. | 0.485 |
SDO50864.1 | SDO50979.1 | SAMN04487957_10770 | SAMN04487957_10772 | Hypothetical protein. | Multidrug resistance protein, MATE family. | 0.429 |
SDO50947.1 | SDO50864.1 | SAMN04487957_10771 | SAMN04487957_10770 | OmpA-like transmembrane domain-containing protein; Belongs to the outer membrane OOP (TC 1.B.6) superfamily. | Hypothetical protein. | 0.485 |
SDO50947.1 | SDO50979.1 | SAMN04487957_10771 | SAMN04487957_10772 | OmpA-like transmembrane domain-containing protein; Belongs to the outer membrane OOP (TC 1.B.6) superfamily. | Multidrug resistance protein, MATE family. | 0.515 |
SDO50979.1 | SDO50864.1 | SAMN04487957_10772 | SAMN04487957_10770 | Multidrug resistance protein, MATE family. | Hypothetical protein. | 0.429 |
SDO50979.1 | SDO50947.1 | SAMN04487957_10772 | SAMN04487957_10771 | Multidrug resistance protein, MATE family. | OmpA-like transmembrane domain-containing protein; Belongs to the outer membrane OOP (TC 1.B.6) superfamily. | 0.515 |