STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO71944.1Hypothetical protein. (161 aa)    
Predicted Functional Partners:
SDO71965.1
Hypothetical protein.
       0.773
SDO71998.1
Hypothetical protein.
       0.526
SDO72034.1
Hypothetical protein.
       0.526
SDO72069.1
Hypothetical protein.
       0.526
SDO72103.1
Crossover junction endodeoxyribonuclease RusA.
       0.526
SDO72128.1
Hypothetical protein.
       0.526
SDO71684.1
Hypothetical protein.
       0.510
SDO71715.1
Hypothetical protein.
       0.510
SDO71733.1
Helix-turn-helix domain-containing protein.
       0.510
SDO71767.1
Hypothetical protein.
       0.510
Your Current Organism:
Halomonas shengliensis
NCBI taxonomy Id: 419597
Other names: CGMCC 1.6444, H. shengliensis, Halomonas shengliensis Wang et al. 2007, LMG 23897, LMG:23897, strain SL014B-85
Server load: low (16%) [HD]