STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO72774.1Hypothetical protein. (78 aa)    
Predicted Functional Partners:
SDO72740.1
Phage head-tail adaptor, putative, SPP1 family.
       0.773
SDO72803.1
Phage protein, HK97 gp10 family.
       0.773
SDO72830.1
Protein of unknown function.
       0.773
SDO72673.1
Hypothetical protein.
       0.487
SDO72608.1
Hypothetical protein.
       0.467
SDO72639.1
Hypothetical protein.
       0.467
SDO72583.1
Phage gp6-like head-tail connector protein.
       0.458
Your Current Organism:
Halomonas shengliensis
NCBI taxonomy Id: 419597
Other names: CGMCC 1.6444, H. shengliensis, Halomonas shengliensis Wang et al. 2007, LMG 23897, LMG:23897, strain SL014B-85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.