STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO69655.1Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (537 aa)    
Predicted Functional Partners:
SDO69750.1
Peptide/nickel transport system permease protein.
 
 0.998
SDO69781.1
Peptide/nickel transport system permease protein.
 
 0.992
SDO06642.1
Peptide/nickel transport system permease protein.
 
 0.987
SDO69810.1
Peptide/nickel transport system substrate-binding protein.
 
 
 0.972
SDO06670.1
Peptide/nickel transport system permease protein.
 
 0.956
SDO06611.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
0.942
SDO06579.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
0.929
SDO69622.1
FAD/FMN-containing dehydrogenase.
 
     0.880
SDO08758.1
Microcin C transport system permease protein.
  
  0.846
SDO69562.1
Histidinol-phosphate aminotransferase.
       0.817
Your Current Organism:
Halomonas shengliensis
NCBI taxonomy Id: 419597
Other names: CGMCC 1.6444, H. shengliensis, Halomonas shengliensis Wang et al. 2007, LMG 23897, LMG:23897, strain SL014B-85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.