STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO71281.1HNH endonuclease. (208 aa)    
Predicted Functional Partners:
SDO71256.1
Hypothetical protein.
 
     0.954
SDO71112.1
Hypothetical protein.
       0.773
SDO71139.1
Rifampin ADP-ribosylating transferase.
       0.773
SDO71163.1
Hypothetical protein.
       0.773
SDO71194.1
Hypothetical protein.
       0.773
SDO71224.1
Hypothetical protein.
       0.773
SDO71309.1
Hypothetical protein.
       0.773
SDO71338.1
Hypothetical protein.
       0.773
SDO71361.1
GcrA cell cycle regulator.
       0.773
SDO71379.1
Hypothetical protein.
       0.768
Your Current Organism:
Halomonas shengliensis
NCBI taxonomy Id: 419597
Other names: CGMCC 1.6444, H. shengliensis, Halomonas shengliensis Wang et al. 2007, LMG 23897, LMG:23897, strain SL014B-85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.