STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO80398.1Salicylate hydroxylase. (439 aa)    
Predicted Functional Partners:
SDO01160.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
   
 
 0.712
SDO74424.1
Urea transport system substrate-binding protein.
   
    0.702
SDO80366.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
     0.643
SDO80429.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
 
   
 0.590
SDN92716.1
Hypothetical protein; Belongs to the cytochrome P450 family.
   
 0.585
SDO80881.1
3-oxoadipate enol-lactonase / 4-carboxymuconolactone decarboxylase.
 
 
 0.583
SDN59008.1
Uncharacterized conserved protein, DUF427 family.
  
     0.580
SDO96131.1
Benzoate/toluate 1,2-dioxygenase reductase subunit.
     
 0.554
SDN61597.1
Nucleoside-diphosphate-sugar epimerase.
  
   0.505
SDN59294.1
2-haloacid dehalogenase.
  
     0.482
Your Current Organism:
Halomonas shengliensis
NCBI taxonomy Id: 419597
Other names: CGMCC 1.6444, H. shengliensis, Halomonas shengliensis Wang et al. 2007, LMG 23897, LMG:23897, strain SL014B-85
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.