STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atpBH+transporting two-sector ATPase alpha/beta subunit central region; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit. (464 aa)    
Predicted Functional Partners:
Maeo_0060
H(+)-transporting two-sector ATPase; PFAM: V-type ATPase 116 kDa subunit; KEGG: mmp:MMP1039 A1A0 ATPase, subunit I; Belongs to the V-ATPase 116 kDa subunit family.
 
 0.999
Maeo_0061
PFAM: H+transporting two-sector ATPase C subunit; KEGG: mmp:MMP1040 A1A0 ATPase, subunit K; Belongs to the V-ATPase proteolipid subunit family.
 
 0.999
atpE
H+transporting two-sector ATPase E subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.999
atpC
ATPase, A1 complex, subunit C; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.999
atpF
Vacuolar H+transporting two-sector ATPase F subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
 0.999
atpA
ATP synthase, A subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
 
0.999
atpD
V-type ATPase, D subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.999
Maeo_0059
TIGRFAM: ATPase A1A0 subunit H; KEGG: mmp:MMP1038 A1A0 ATPase, subunit H.
  
 0.992
Maeo_0068
PFAM: Protein of unknown function DUF22; KEGG: mmp:MMP1047 hypothetical protein.
  
    0.984
Maeo_0802
TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; plasma-membrane proton-efflux P-type ATPase; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: mja:MJ1226 plasma membrane ATPase 1.
  
 0.932
Your Current Organism:
Methanococcus aeolicus
NCBI taxonomy Id: 419665
Other names: M. aeolicus Nankai-3, Methanococcus aeolicus Nankai-3, Methanococcus aeolicus str. Nankai-3, Methanococcus aeolicus strain Nankai-3
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.