STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Maeo_0092PFAM: regulatory protein ArsR; KEGG: mla:Mlab_0824 hypothetical protein. (249 aa)    
Predicted Functional Partners:
Maeo_0093
PFAM: MTH865-like family protein; KEGG: mac:MA2221 hypothetical protein.
 
     0.835
Maeo_0413
PFAM: Protein of unknown function DUF1616; KEGG: pfu:PF0810 hypothetical protein.
  
     0.656
Maeo_0691
KEGG: mmp:MMP1704 hypothetical protein.
  
     0.594
mtrE
Tetrahydromethanopterin S-methyltransferase, subunit E; Part of a complex that catalyzes the formation of methyl- coenzyme M and tetrahydromethanopterin from coenzyme M and methyl- tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step.
  
     0.574
Maeo_0297
Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: mmp:MMP1165 haloacid dehalogenase/epoxide hydrolase:ATPase, E1-E2 type:heavy metal transport/detoxification protein.
 
  
 0.563
Maeo_0016
PFAM: Protein of unknown function DUF63; KEGG: mmp:MMP0328 hypothetical protein.
  
     0.561
Maeo_0880
PFAM: Uncharacterised conserved protein UCP006577; KEGG: mmp:MMP0698 hypothetical protein.
  
     0.560
mtrC
Tetrahydromethanopterin S-methyltransferase; Part of a complex that catalyzes the formation of methyl- coenzyme M and tetrahydromethanopterin from coenzyme M and methyl- tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step.
  
     0.552
Maeo_1495
KEGG: mmp:MMP0146 hypothetical protein.
 
  
 0.534
mtrA-2
Tetrahydromethanopterin S-methyltransferase, subunit A; Part of a complex that catalyzes the formation of methyl- coenzyme M and tetrahydromethanopterin from coenzyme M and methyl- tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step; Belongs to the MtrA family.
 
     0.518
Your Current Organism:
Methanococcus aeolicus
NCBI taxonomy Id: 419665
Other names: M. aeolicus Nankai-3, Methanococcus aeolicus Nankai-3, Methanococcus aeolicus str. Nankai-3, Methanococcus aeolicus strain Nankai-3
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