STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Maeo_0815PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: mmp:MMP1284 DEAD/DEAH box helicase:helicase, C-terminal. (816 aa)    
Predicted Functional Partners:
Maeo_0217
PFAM: phosphoesterase RecJ domain protein; RNA binding S1 domain protein; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: mmp:MMP1314 phosphoesterase, RecJ-like:RNA binding S1:OB-fold nucleic acid binding domain related protein.
  
    0.707
Maeo_0999
PFAM: ExsB family protein; KEGG: mmp:MMP0158 hypothetical protein.
  
     0.554
Maeo_0273
PFAM: Protein of unknown function DUF555; KEGG: mmp:MMP1509 hypothetical protein; Belongs to the UPF0212 family.
  
     0.534
ef1b
Translation elongation factor aEF-1 beta; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA.
  
     0.531
Maeo_0952
KEGG: mja:MJ1451 hypothetical protein.
  
     0.524
Maeo_0758
KEGG: mmp:MMP0668 hypothetical protein.
  
     0.500
Maeo_1107
KEGG: mmp:MMP0661 putative ATP binding related protein.
  
    0.483
trm1
N2,N2-dimethylguanosine tRNA methyltransferase; Dimethylates a single guanine residue at position 26 of a number of tRNAs using S-adenosyl-L-methionine as donor of the methyl groups; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.
  
    0.470
Maeo_0409
KEGG: mmp:MMP0364 hypothetical protein.
  
     0.466
Maeo_0133
PFAM: Protein of unknown function DUF371; KEGG: mja:MJ0206 hypothetical protein.
  
    0.447
Your Current Organism:
Methanococcus aeolicus
NCBI taxonomy Id: 419665
Other names: M. aeolicus Nankai-3, Methanococcus aeolicus Nankai-3, Methanococcus aeolicus str. Nankai-3, Methanococcus aeolicus strain Nankai-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.