STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP72930.1Hypothetical protein. (228 aa)    
Predicted Functional Partners:
SEP73019.1
Beta-barrel assembly machine subunit BamA.
 
 
   0.871
SEP73054.1
Periplasmic chaperone for outer membrane proteins Skp.
 
 
   0.826
SEP72973.1
Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
  
    0.825
SEP72859.1
Hypothetical protein.
 
     0.771
SEQ06106.1
Probable protein-translocating porin PorT.
 
     0.770
SEP81253.1
Protein involved in gliding motility SprE.
  
     0.762
SEP73352.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.757
SEP86872.1
Putative DNA-binding domain-containing protein.
  
    0.739
SEP74374.1
Protein involved in gliding motility SprA.
  
     0.730
SEQ94060.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.727
Your Current Organism:
Hyunsoonleella jejuensis
NCBI taxonomy Id: 419940
Other names: DSM 21035, Flavobacteriaceae bacterium CNU004, H. jejuensis, Hyunsoonleella jejuensis Yoon et al. 2010 emend. Park et al. 2013, KCTC 22242, strain CNU004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.