STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP84054.1Hypothetical protein. (483 aa)    
Predicted Functional Partners:
SEP84087.1
Glycosyl hydrolases family 2, TIM barrel domain.
 
    0.951
SEP84030.1
Glycosyl hydrolases family 16.
 
     0.898
SEP83924.1
Exo-beta-1,3-glucanase, GH17 family.
 
     0.839
SEP83994.1
Protein of unknown function.
 
     0.834
SEP83958.1
Hypothetical protein.
 
  
  0.820
SEP83902.1
Exo-beta-1,3-glucanase, GH17 family.
 
     0.817
SEP83836.1
Glycoside/pentoside/hexuronide:cation symporter, GPH family.
 
     0.797
SEP83776.1
Exo-beta-1,3-glucanase, GH17 family.
 
     0.782
SEP83712.1
Exo-beta-1,3-glucanase, GH17 family.
 
     0.772
SEP83871.1
Glucosylceramidase; Belongs to the glycosyl hydrolase 30 family.
 
     0.771
Your Current Organism:
Hyunsoonleella jejuensis
NCBI taxonomy Id: 419940
Other names: DSM 21035, Flavobacteriaceae bacterium CNU004, H. jejuensis, Hyunsoonleella jejuensis Yoon et al. 2010 emend. Park et al. 2013, KCTC 22242, strain CNU004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.