STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP84474.1Gliding motility-associated C-terminal domain-containing protein. (447 aa)    
Predicted Functional Partners:
SEP84506.1
OmpA family protein.
       0.773
rnpA
Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
 
     0.676
SEP74862.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.638
SEQ82910.1
Hypothetical protein.
  
     0.632
SEP84538.1
Carboxyl-terminal processing protease; Belongs to the peptidase S41A family.
       0.625
SEP84569.1
Protein of unknown function.
       0.625
SEP84442.1
Gliding motility-associated C-terminal domain-containing protein.
 
    
0.584
SEQ36449.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.567
SEQ11285.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.548
SEP91678.1
Por secretion system C-terminal sorting domain-containing protein.
 
     0.546
Your Current Organism:
Hyunsoonleella jejuensis
NCBI taxonomy Id: 419940
Other names: DSM 21035, Flavobacteriaceae bacterium CNU004, H. jejuensis, Hyunsoonleella jejuensis Yoon et al. 2010 emend. Park et al. 2013, KCTC 22242, strain CNU004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.