STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP85475.1Oxygen tolerance. (590 aa)    
Predicted Functional Partners:
SEP85446.1
SH3 domain-containing protein.
     0.995
SEP85538.1
Ca-activated chloride channel family protein.
     0.945
SEP85574.1
Ca-activated chloride channel family protein.
    0.938
SEP85506.1
Tetratricopeptide repeat-containing protein.
 
 
   0.906
SEP85608.1
Hypothetical protein.
 
     0.867
SEP85643.1
Protein of unknown function DUF58.
 
    0.867
SEQ51458.1
CarboxypepD_reg-like domain-containing protein.
  
     0.673
ribB
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.673
SEP94923.1
Ig-like domain-containing protein.
  
     0.657
SEQ80493.1
Protein of unknown function.
  
     0.643
Your Current Organism:
Hyunsoonleella jejuensis
NCBI taxonomy Id: 419940
Other names: DSM 21035, Flavobacteriaceae bacterium CNU004, H. jejuensis, Hyunsoonleella jejuensis Yoon et al. 2010 emend. Park et al. 2013, KCTC 22242, strain CNU004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.