STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP86402.1Hypothetical protein. (750 aa)    
Predicted Functional Partners:
SEP86431.1
Hypothetical protein.
       0.689
SEP86458.1
Glycine/D-amino acid oxidase.
       0.689
SEQ57313.1
Hypothetical protein.
  
     0.599
SEQ57343.1
Peptidase_G2, IMC autoproteolytic cleavage domain.
  
     0.595
SEQ48702.1
Tetratricopeptide repeat-containing protein.
  
     0.573
SEQ57804.1
Peptidase family M48.
  
     0.502
SER05091.1
Thiol-disulfide isomerase or thioredoxin.
  
     0.483
SEP86484.1
acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
       0.454
SEQ54178.1
Phosphate-selective porin.
  
     0.448
SEQ41547.1
Anti-sigma-K factor rskA.
  
     0.447
Your Current Organism:
Hyunsoonleella jejuensis
NCBI taxonomy Id: 419940
Other names: DSM 21035, Flavobacteriaceae bacterium CNU004, H. jejuensis, Hyunsoonleella jejuensis Yoon et al. 2010 emend. Park et al. 2013, KCTC 22242, strain CNU004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.