STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ06257.1Isocitrate dehydrogenase; Belongs to the monomeric-type IDH family. (736 aa)    
Predicted Functional Partners:
SEQ34498.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.999
SEQ81023.1
Aconitase.
 
 
 0.971
SEQ08740.1
Aspartate aminotransferase.
 
 
 
  0.941
SEP94168.1
Glutamate synthase (NADH) large subunit.
     
 0.924
SEQ15689.1
Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate.
  
  
 0.893
SEQ51779.1
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
   
  0.893
SEP89480.1
2-oxoglutarate dehydrogenase E1 component.
   
 
 0.885
SEP78566.1
Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
  0.863
SEP94139.1
Glutamate synthase (NADH) small subunit.
   
 
  0.862
SEP67279.1
Argininosuccinate lyase.
     
 0.861
Your Current Organism:
Hyunsoonleella jejuensis
NCBI taxonomy Id: 419940
Other names: DSM 21035, Flavobacteriaceae bacterium CNU004, H. jejuensis, Hyunsoonleella jejuensis Yoon et al. 2010 emend. Park et al. 2013, KCTC 22242, strain CNU004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.