STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ08585.1Hypothetical protein. (68 aa)    
Predicted Functional Partners:
SEQ08477.1
Mn2+ and Fe2+ transporters of the NRAMP family.
 
     0.828
SEQ08508.1
RNA polymerase sigma-70 factor, ECF subfamily.
       0.824
SEQ08555.1
Hypothetical protein.
       0.804
SER10551.1
Hypothetical protein.
  
     0.713
SEP89385.1
Biopolymer transport protein ExbD.
  
     0.662
lipA
Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
       0.662
SEQ03509.1
Tetratricopeptide repeat-containing protein.
  
     0.647
SEP74276.1
Protein TonB.
  
     0.628
SEQ16217.1
Hypothetical protein.
  
     0.556
SEQ07188.1
Hypothetical protein.
  
     0.551
Your Current Organism:
Hyunsoonleella jejuensis
NCBI taxonomy Id: 419940
Other names: DSM 21035, Flavobacteriaceae bacterium CNU004, H. jejuensis, Hyunsoonleella jejuensis Yoon et al. 2010 emend. Park et al. 2013, KCTC 22242, strain CNU004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.