STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ13737.1Starch-binding associating with outer membrane. (506 aa)    
Predicted Functional Partners:
SEQ13643.1
TonB-linked outer membrane protein, SusC/RagA family.
 
 
   0.961
SEQ04854.1
TonB-linked outer membrane protein, SusC/RagA family.
 
 
   0.834
SEP98944.1
TonB-linked outer membrane protein, SusC/RagA family.
 
 
   0.827
SEQ55981.1
TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region.
  
 
   0.783
SEQ13768.1
Hypothetical protein.
       0.773
SER05854.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.757
SEQ02044.1
Por secretion system C-terminal sorting domain-containing protein.
  
 
   0.714
SEP99151.1
Por secretion system C-terminal sorting domain-containing protein.
  
 0.710
SER01276.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.698
SEQ78195.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.599
Your Current Organism:
Hyunsoonleella jejuensis
NCBI taxonomy Id: 419940
Other names: DSM 21035, Flavobacteriaceae bacterium CNU004, H. jejuensis, Hyunsoonleella jejuensis Yoon et al. 2010 emend. Park et al. 2013, KCTC 22242, strain CNU004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.