STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ16593.1Lycopene beta-cyclase. (380 aa)    
Predicted Functional Partners:
SEQ16674.1
Phytoene desaturase.
 
 
 0.984
SEQ16615.1
Beta-carotene 3-hydroxylase.
 
  
 0.981
SEQ16634.1
Phytoene/squalene synthetase.
 
 
 0.921
SEP69050.1
Electron transfer flavoprotein beta subunit.
  
 
 0.838
SEQ16701.1
B12 binding domain-containing protein.
 
    0.805
SEP69078.1
Electron transfer flavoprotein alpha subunit apoprotein.
  
 
 0.730
SEQ99271.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
    
  0.656
SEQ95537.1
Hypothetical protein.
  
     0.655
SEQ41194.1
Hypothetical protein.
  
     0.643
SEQ88969.1
Concanavalin A-like lectin/glucanases superfamily protein.
  
     0.576
Your Current Organism:
Hyunsoonleella jejuensis
NCBI taxonomy Id: 419940
Other names: DSM 21035, Flavobacteriaceae bacterium CNU004, H. jejuensis, Hyunsoonleella jejuensis Yoon et al. 2010 emend. Park et al. 2013, KCTC 22242, strain CNU004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.