STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ36246.1Hypothetical protein. (111 aa)    
Predicted Functional Partners:
SEQ36416.1
Protein of unknown function.
 
     0.950
SEP68690.1
Thiol:disulfide interchange protein DsbD.
  
 
 0.708
SER05122.1
Thiol:disulfide interchange protein DsbD.
  
 
 0.708
SEQ36449.1
Por secretion system C-terminal sorting domain-containing protein.
 
    0.647
SEQ46970.1
Hypothetical protein.
  
     0.567
SEQ97365.1
PAP2 superfamily protein.
  
     0.524
SEP80365.1
Hypothetical protein.
  
     0.490
SER06719.1
Hypothetical protein.
  
     0.478
SEQ38822.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
     0.472
SEQ40253.1
Protein of unknown function.
  
    0.471
Your Current Organism:
Hyunsoonleella jejuensis
NCBI taxonomy Id: 419940
Other names: DSM 21035, Flavobacteriaceae bacterium CNU004, H. jejuensis, Hyunsoonleella jejuensis Yoon et al. 2010 emend. Park et al. 2013, KCTC 22242, strain CNU004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.