STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ37210.1Outer membrane protein beta-barrel domain-containing protein. (163 aa)    
Predicted Functional Partners:
SEQ40960.1
CarboxypepD_reg-like domain-containing protein.
  
     0.744
aroQ
3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.
       0.743
SEQ87283.1
Protein of unknown function.
  
     0.701
SEQ42837.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.700
SER04646.1
Tetratricopeptide repeat-containing protein.
  
     0.697
SER05687.1
Protein of unknown function.
  
     0.677
SEQ97365.1
PAP2 superfamily protein.
  
    0.669
SEQ53859.1
Hypothetical protein.
 
   0.660
SEQ57313.1
Hypothetical protein.
  
     0.655
SEQ07166.1
Hypothetical protein.
  
     0.642
Your Current Organism:
Hyunsoonleella jejuensis
NCBI taxonomy Id: 419940
Other names: DSM 21035, Flavobacteriaceae bacterium CNU004, H. jejuensis, Hyunsoonleella jejuensis Yoon et al. 2010 emend. Park et al. 2013, KCTC 22242, strain CNU004
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