STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ48895.1N-formylglutamate amidohydrolase. (276 aa)    
Predicted Functional Partners:
SEQ48862.1
Conserved hypothetical protein.
     0.994
gshB
Glutathione synthase; Belongs to the prokaryotic GSH synthase family.
 
     0.875
SEP94168.1
Glutamate synthase (NADH) large subunit.
     
 0.872
SEP75183.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor.
    
  0.726
SEQ86504.1
Imidazolonepropionase.
  
  
 0.720
SEQ48956.1
3-mercaptopyruvate sulfurtransferase SseA, contains two rhodanese domains.
       0.642
SEQ48928.1
Hypothetical protein.
       0.639
SEQ83021.1
Protein of unknown function (DU1801).
  
     0.566
SEQ46085.1
Biotin carboxylase.
 
  
  0.490
SEP87074.1
Beta-aspartyl-peptidase (threonine type).
 
  
  0.476
Your Current Organism:
Hyunsoonleella jejuensis
NCBI taxonomy Id: 419940
Other names: DSM 21035, Flavobacteriaceae bacterium CNU004, H. jejuensis, Hyunsoonleella jejuensis Yoon et al. 2010 emend. Park et al. 2013, KCTC 22242, strain CNU004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.