STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ53068.1Hypothetical protein. (168 aa)    
Predicted Functional Partners:
SEQ53096.1
Hypothetical protein.
 
    0.835
SEP86872.1
Putative DNA-binding domain-containing protein.
  
     0.686
SEP95610.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.681
SEQ53045.1
RNA polymerase sigma-70 factor, ECF subfamily.
       0.676
SEP81590.1
Hypothetical protein.
  
     0.662
SEQ12306.1
Hypothetical protein.
  
     0.644
SEQ98593.1
Hypothetical protein.
  
     0.639
SEQ45393.1
Outer membrane receptor proteins, mostly Fe transport.
  
     0.614
SEQ07188.1
Hypothetical protein.
  
     0.611
SER04143.1
Protein of unknown function.
  
     0.596
Your Current Organism:
Hyunsoonleella jejuensis
NCBI taxonomy Id: 419940
Other names: DSM 21035, Flavobacteriaceae bacterium CNU004, H. jejuensis, Hyunsoonleella jejuensis Yoon et al. 2010 emend. Park et al. 2013, KCTC 22242, strain CNU004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.