Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SEQ03150.1 | SEQ73763.1 | SAMN05421824_0974 | SAMN05421824_2177 | SNF2 family N-terminal domain-containing protein. | Cold-shock DNA-binding protein family. | 0.742 |
| SEQ03150.1 | SEQ98083.1 | SAMN05421824_0974 | SAMN05421824_2739 | SNF2 family N-terminal domain-containing protein. | RNA polymerase Rpb6. | 0.993 |
| SEQ03150.1 | rplC | SAMN05421824_0974 | SAMN05421824_2138 | SNF2 family N-terminal domain-containing protein. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.877 |
| SEQ03150.1 | rplT | SAMN05421824_0974 | SAMN05421824_1364 | SNF2 family N-terminal domain-containing protein. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.462 |
| SEQ03150.1 | rpoB | SAMN05421824_0974 | SAMN05421824_1257 | SNF2 family N-terminal domain-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.998 |
| SEQ03150.1 | rpsE | SAMN05421824_0974 | SAMN05421824_2155 | SNF2 family N-terminal domain-containing protein. | SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.801 |
| SEQ03150.1 | rpsL | SAMN05421824_0974 | SAMN05421824_2134 | SNF2 family N-terminal domain-containing protein. | SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.547 |
| SEQ03150.1 | rpsQ | SAMN05421824_0974 | SAMN05421824_2147 | SNF2 family N-terminal domain-containing protein. | SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.574 |
| SEQ73763.1 | SEQ03150.1 | SAMN05421824_2177 | SAMN05421824_0974 | Cold-shock DNA-binding protein family. | SNF2 family N-terminal domain-containing protein. | 0.742 |
| SEQ73763.1 | SEQ98083.1 | SAMN05421824_2177 | SAMN05421824_2739 | Cold-shock DNA-binding protein family. | RNA polymerase Rpb6. | 0.567 |
| SEQ73763.1 | rplC | SAMN05421824_2177 | SAMN05421824_2138 | Cold-shock DNA-binding protein family. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.555 |
| SEQ73763.1 | rplS | SAMN05421824_2177 | SAMN05421824_2050 | Cold-shock DNA-binding protein family. | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.575 |
| SEQ73763.1 | rplT | SAMN05421824_2177 | SAMN05421824_1364 | Cold-shock DNA-binding protein family. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.577 |
| SEQ73763.1 | rpmA | SAMN05421824_2177 | SAMN05421824_0706 | Cold-shock DNA-binding protein family. | LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family. | 0.574 |
| SEQ73763.1 | rpoB | SAMN05421824_2177 | SAMN05421824_1257 | Cold-shock DNA-binding protein family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.560 |
| SEQ73763.1 | rpsE | SAMN05421824_2177 | SAMN05421824_2155 | Cold-shock DNA-binding protein family. | SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.565 |
| SEQ73763.1 | rpsL | SAMN05421824_2177 | SAMN05421824_2134 | Cold-shock DNA-binding protein family. | SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.586 |
| SEQ73763.1 | rpsQ | SAMN05421824_2177 | SAMN05421824_2147 | Cold-shock DNA-binding protein family. | SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.567 |
| SEQ98083.1 | SEQ03150.1 | SAMN05421824_2739 | SAMN05421824_0974 | RNA polymerase Rpb6. | SNF2 family N-terminal domain-containing protein. | 0.993 |
| SEQ98083.1 | SEQ73763.1 | SAMN05421824_2739 | SAMN05421824_2177 | RNA polymerase Rpb6. | Cold-shock DNA-binding protein family. | 0.567 |
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