STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ76169.1Starch-binding associating with outer membrane. (633 aa)    
Predicted Functional Partners:
SEQ76146.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.941
SEQ76204.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.909
SEQ76263.1
Protein of unknown function.
 
     0.876
SEQ78268.1
Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
 
   0.816
SEQ78869.1
Xylan 1,4-beta-xylosidase.
  
     0.758
SEQ78506.1
Por secretion system C-terminal sorting domain-containing protein.
  
  
  0.750
SEQ78329.1
Por secretion system C-terminal sorting domain-containing protein.
  
 
   0.740
SEQ76485.1
Carbohydrate binding module (family 6); Belongs to the glycosyl hydrolase 43 family.
 
     0.734
SEP99151.1
Por secretion system C-terminal sorting domain-containing protein.
  
 0.710
SEQ13643.1
TonB-linked outer membrane protein, SusC/RagA family.
  
 
   0.710
Your Current Organism:
Hyunsoonleella jejuensis
NCBI taxonomy Id: 419940
Other names: DSM 21035, Flavobacteriaceae bacterium CNU004, H. jejuensis, Hyunsoonleella jejuensis Yoon et al. 2010 emend. Park et al. 2013, KCTC 22242, strain CNU004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.