STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ77080.1alpha-L-rhamnosidase. (793 aa)    
Predicted Functional Partners:
SEQ77282.1
alpha-L-rhamnosidase.
 
     0.877
SEQ77313.1
Glycosyl hydrolases family 2, sugar binding domain.
 
     0.832
SEQ78506.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.774
SEQ77540.1
alpha-L-rhamnosidase.
 
     0.766
SEQ79201.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.759
SEQ77039.1
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
     0.753
SEQ77909.1
alpha-L-rhamnosidase.
 
     0.749
SEQ78913.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
  
     0.743
SEQ76748.1
Glycosyl hydrolases family 2, sugar binding domain; Belongs to the glycosyl hydrolase 2 family.
  
     0.730
SEQ76880.1
AraC-type DNA-binding protein.
 
     0.717
Your Current Organism:
Hyunsoonleella jejuensis
NCBI taxonomy Id: 419940
Other names: DSM 21035, Flavobacteriaceae bacterium CNU004, H. jejuensis, Hyunsoonleella jejuensis Yoon et al. 2010 emend. Park et al. 2013, KCTC 22242, strain CNU004
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