STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ79687.1Sugar (pentulose or hexulose) kinase. (458 aa)    
Predicted Functional Partners:
SEQ79661.1
L-rhamnose isomerase / sugar isomerase.
 
  
 0.983
SEQ79634.1
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
 
 
 0.978
SEQ79708.1
L-fuculose-phosphate aldolase.
  
 
 0.944
SEQ79572.1
Regulatory protein, gntR family.
 
 
 
 0.884
SEQ79547.1
Transcriptional regulator, GntR family.
 
 
 
 0.880
SEQ78449.1
L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose.
 
  
 0.823
SEQ79737.1
L-lactate dehydrogenase (cytochrome).
 
  
 0.722
SEQ40856.1
Transcriptional regulator, GntR family.
 
 
 
 0.588
SEQ75303.1
Protein of unknown function.
  
     0.519
SEQ75704.1
Transcriptional regulator, GntR family.
 
 
 
 0.511
Your Current Organism:
Hyunsoonleella jejuensis
NCBI taxonomy Id: 419940
Other names: DSM 21035, Flavobacteriaceae bacterium CNU004, H. jejuensis, Hyunsoonleella jejuensis Yoon et al. 2010 emend. Park et al. 2013, KCTC 22242, strain CNU004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.