STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ86986.1pRiA4b ORF-3-like protein. (170 aa)    
Predicted Functional Partners:
SEQ33279.1
Protein of unknown function.
  
     0.770
SER06127.1
Protein involved in gliding motility GldN.
  
     0.763
SEP93515.1
Protein of unknown function.
  
     0.757
SEQ81370.1
Uncharacterised ACR, YkgG family COG1556.
  
     0.740
SER00526.1
Protein of unknown function.
  
     0.728
SER00701.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
  
     0.728
SEP85608.1
Hypothetical protein.
  
     0.725
SEP86668.1
Uncharacterized metal-binding protein YceD, DUF177 family.
  
     0.721
SEQ73615.1
Protein involved in gliding motility GldI.
  
     0.685
SER06915.1
Hypothetical protein.
  
     0.684
Your Current Organism:
Hyunsoonleella jejuensis
NCBI taxonomy Id: 419940
Other names: DSM 21035, Flavobacteriaceae bacterium CNU004, H. jejuensis, Hyunsoonleella jejuensis Yoon et al. 2010 emend. Park et al. 2013, KCTC 22242, strain CNU004
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