STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ88969.1Concanavalin A-like lectin/glucanases superfamily protein. (2214 aa)    
Predicted Functional Partners:
SEQ89066.1
Por secretion system C-terminal sorting domain-containing protein.
 
 
  0.852
SEQ78329.1
Por secretion system C-terminal sorting domain-containing protein.
  
 
   0.765
SEP76067.1
Por secretion system C-terminal sorting domain-containing protein.
  
  0.747
SEP74589.1
Long-chain fatty acid transport protein.
  
     0.738
SEP99151.1
Por secretion system C-terminal sorting domain-containing protein.
  
 0.710
SEQ78869.1
Xylan 1,4-beta-xylosidase.
  
     0.696
SER11255.1
HYR domain-containing protein.
 
   
  0.684
SEQ11285.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.678
SER01304.1
MAM domain-containing protein, meprin/A5/mu; Partial gene; manually curated.
  
    0.640
SEQ78506.1
Por secretion system C-terminal sorting domain-containing protein.
  
  
  0.632
Your Current Organism:
Hyunsoonleella jejuensis
NCBI taxonomy Id: 419940
Other names: DSM 21035, Flavobacteriaceae bacterium CNU004, H. jejuensis, Hyunsoonleella jejuensis Yoon et al. 2010 emend. Park et al. 2013, KCTC 22242, strain CNU004
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