STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ95756.1TspO and MBR related proteins. (153 aa)    
Predicted Functional Partners:
SEQ95679.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
    0.815
SEQ95707.1
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
  
    0.803
SEQ95775.1
Ligand-binding SRPBCC domain-containing protein.
       0.789
SEQ95731.1
Hypothetical protein.
       0.776
SEQ95651.1
Hypothetical protein.
       0.709
SEQ95801.1
Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family.
  
  
 0.673
SEQ95510.1
Deoxyribodipyrimidine photo-lyase family protein (cryptochrome); Belongs to the DNA photolyase family.
 
  
 0.646
SEQ95566.1
TIGR03643 family protein.
 
     0.552
SEQ95624.1
Hypothetical protein.
 
     0.536
SEQ95240.1
Deoxyribodipyrimidine photo-lyase (single-stranded DNA-specific); Belongs to the DNA photolyase family.
  
  
 0.506
Your Current Organism:
Hyunsoonleella jejuensis
NCBI taxonomy Id: 419940
Other names: DSM 21035, Flavobacteriaceae bacterium CNU004, H. jejuensis, Hyunsoonleella jejuensis Yoon et al. 2010 emend. Park et al. 2013, KCTC 22242, strain CNU004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.