STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER00807.1Galactonate dehydratase. (385 aa)    
Predicted Functional Partners:
SER00752.1
2-dehydro-3-deoxygluconokinase.
    
  0.883
SER00786.1
2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase.
 
   
 0.868
uxuA
D-mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
    
  0.835
SER00730.1
DNA-binding transcriptional regulator, FadR family.
 
     0.801
SEQ46147.1
Sugar lactone lactonase YvrE.
 
  
  0.648
SEQ82844.1
2-dehydro-3-deoxygluconokinase.
    
  0.505
SER00827.1
2-dehydro-3-deoxygluconokinase.
    
  0.505
SEQ46060.1
2-deoxy-D-gluconate 3-dehydrogenase.
  
  
  0.430
Your Current Organism:
Hyunsoonleella jejuensis
NCBI taxonomy Id: 419940
Other names: DSM 21035, Flavobacteriaceae bacterium CNU004, H. jejuensis, Hyunsoonleella jejuensis Yoon et al. 2010 emend. Park et al. 2013, KCTC 22242, strain CNU004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.