STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER01187.1poly(beta-D-mannuronate) lyase. (778 aa)    
Predicted Functional Partners:
SER01141.1
Alginate lyase.
 
  
  0.971
SER01116.1
Alginate lyase.
 
  
  0.968
SER01090.1
Cupin domain-containing protein.
 
     0.919
SER00893.1
Transcriptional regulator, GntR family.
 
     0.765
SER00851.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
     0.757
SER00872.1
MFS transporter, ACS family, hexuronate transporter.
 
    0.753
SER00917.1
Alginate lyase.
 
  
  0.745
SER01216.1
Por secretion system C-terminal sorting domain-containing protein.
 
  
  0.730
SEP99151.1
Por secretion system C-terminal sorting domain-containing protein.
  
 
 0.696
SER01066.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.691
Your Current Organism:
Hyunsoonleella jejuensis
NCBI taxonomy Id: 419940
Other names: DSM 21035, Flavobacteriaceae bacterium CNU004, H. jejuensis, Hyunsoonleella jejuensis Yoon et al. 2010 emend. Park et al. 2013, KCTC 22242, strain CNU004
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