STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER05906.1SusE outer membrane protein. (583 aa)    
Predicted Functional Partners:
SER05882.1
Starch-binding associating with outer membrane.
 
 
   0.945
SER05854.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.935
SER05932.1
Glucosylceramidase; Belongs to the glycosyl hydrolase 30 family.
 
     0.869
SER05829.1
Transcriptional regulator.
 
     0.804
SER05955.1
Glucosylceramidase; Belongs to the glycosyl hydrolase 30 family.
 
     0.794
SEQ14459.1
Gliding motility-associated C-terminal domain-containing protein.
  
 
   0.669
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
   
  0.653
SEQ56530.1
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
  
  0.619
SEQ58175.1
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
    
  0.615
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
  0.614
Your Current Organism:
Hyunsoonleella jejuensis
NCBI taxonomy Id: 419940
Other names: DSM 21035, Flavobacteriaceae bacterium CNU004, H. jejuensis, Hyunsoonleella jejuensis Yoon et al. 2010 emend. Park et al. 2013, KCTC 22242, strain CNU004
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