Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG85236.1 | OJG87203.1 | RV16_GL001376 | RV16_GL000796 | PTS system, N-acetylglucosamine-specific IIBC component. | Glucokinase. | 0.977 |
OJG85236.1 | OJG88291.1 | RV16_GL001376 | RV16_GL000394 | PTS system, N-acetylglucosamine-specific IIBC component. | PTS system, IIBC component. | 0.999 |
OJG85236.1 | OJG89830.1 | RV16_GL001376 | RV16_GL002012 | PTS system, N-acetylglucosamine-specific IIBC component. | PTS system, sucrose-specific IIBC component. | 0.999 |
OJG85236.1 | OJG90262.1 | RV16_GL001376 | RV16_GL001663 | PTS system, N-acetylglucosamine-specific IIBC component. | PTS system beta-glucoside-specific transporter subunit IIABC. | 0.999 |
OJG85236.1 | OJG90785.1 | RV16_GL001376 | RV16_GL001033 | PTS system, N-acetylglucosamine-specific IIBC component. | Hypothetical protein; Belongs to the glycosyl hydrolase 1 family. | 0.856 |
OJG85236.1 | OJG91118.1 | RV16_GL001376 | RV16_GL000104 | PTS system, N-acetylglucosamine-specific IIBC component. | PTS system, trehalose-specific IIBC component. | 0.999 |
OJG85236.1 | pgi | RV16_GL001376 | RV16_GL000716 | PTS system, N-acetylglucosamine-specific IIBC component. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.932 |
OJG87203.1 | OJG85236.1 | RV16_GL000796 | RV16_GL001376 | Glucokinase. | PTS system, N-acetylglucosamine-specific IIBC component. | 0.977 |
OJG87203.1 | OJG88291.1 | RV16_GL000796 | RV16_GL000394 | Glucokinase. | PTS system, IIBC component. | 0.977 |
OJG87203.1 | OJG89830.1 | RV16_GL000796 | RV16_GL002012 | Glucokinase. | PTS system, sucrose-specific IIBC component. | 0.977 |
OJG87203.1 | OJG90262.1 | RV16_GL000796 | RV16_GL001663 | Glucokinase. | PTS system beta-glucoside-specific transporter subunit IIABC. | 0.977 |
OJG87203.1 | OJG90785.1 | RV16_GL000796 | RV16_GL001033 | Glucokinase. | Hypothetical protein; Belongs to the glycosyl hydrolase 1 family. | 0.833 |
OJG87203.1 | OJG91118.1 | RV16_GL000796 | RV16_GL000104 | Glucokinase. | PTS system, trehalose-specific IIBC component. | 0.977 |
OJG87203.1 | pgi | RV16_GL000796 | RV16_GL000716 | Glucokinase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.970 |
OJG88291.1 | OJG85236.1 | RV16_GL000394 | RV16_GL001376 | PTS system, IIBC component. | PTS system, N-acetylglucosamine-specific IIBC component. | 0.999 |
OJG88291.1 | OJG87203.1 | RV16_GL000394 | RV16_GL000796 | PTS system, IIBC component. | Glucokinase. | 0.977 |
OJG88291.1 | OJG89830.1 | RV16_GL000394 | RV16_GL002012 | PTS system, IIBC component. | PTS system, sucrose-specific IIBC component. | 0.999 |
OJG88291.1 | OJG90262.1 | RV16_GL000394 | RV16_GL001663 | PTS system, IIBC component. | PTS system beta-glucoside-specific transporter subunit IIABC. | 0.999 |
OJG88291.1 | OJG90785.1 | RV16_GL000394 | RV16_GL001033 | PTS system, IIBC component. | Hypothetical protein; Belongs to the glycosyl hydrolase 1 family. | 0.856 |
OJG88291.1 | OJG91118.1 | RV16_GL000394 | RV16_GL000104 | PTS system, IIBC component. | PTS system, trehalose-specific IIBC component. | 0.999 |
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