Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
OJG90801.1ABC transporter ATP-binding protein. (255 aa)    
Predicted Functional Partners:
OJG90802.1
ABC superfamily ATP binding cassette transporter, membrane protein.
 
 0.986
OJG89678.1
Hypothetical protein.
  
 
 0.891
OJG88824.1
Two-component system sensor histidine kinase.
 
 
 0.868
OJG87411.1
Hypothetical protein.
 
 
 0.842
OJG90351.1
Hypothetical protein.
 
   0.829
OJG88866.1
Hypothetical protein.
 
 
 0.819
OJG87413.1
Hypothetical protein.
 
 
 0.691
OJG91149.1
Hypothetical protein.
  
   0.672
OJG88814.1
Hypothetical protein.
  
   0.665
OJG91036.1
Efflux ABC transporter permease.
   
   0.619
Your Current Organism:
Enterococcus saccharolyticus
NCBI taxonomy Id: 41997
Other names: ATCC 43076, CCUG 27643, CCUG 33311, CIP 103246, DSM 20726, E. saccharolyticus, JCM 8734, LMG 11427, LMG:11427, NBRC 100493, NCDO 2594, NCIMB 702594, Streptococcus saccharolyticus
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