STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG90801.1ABC transporter ATP-binding protein. (255 aa)    
Predicted Functional Partners:
OJG90802.1
ABC superfamily ATP binding cassette transporter, membrane protein.
 
 0.973
OJG89678.1
Hypothetical protein.
  
 0.958
OJG88866.1
Hypothetical protein.
 
 0.922
OJG90351.1
Hypothetical protein.
 
 0.912
OJG87413.1
Hypothetical protein.
 
 0.861
OJG91149.1
Hypothetical protein.
 
 0.772
OJG88814.1
Hypothetical protein.
 
 0.767
OJG91036.1
Efflux ABC transporter permease.
  
 0.735
OJG85853.1
Efflux ABC transporter permease.
  
 0.735
OJG88824.1
Two-component system sensor histidine kinase.
 
  
 0.702
Your Current Organism:
Enterococcus saccharolyticus
NCBI taxonomy Id: 41997
Other names: ATCC 43076, CCUG 27643, CCUG 33311, CIP 103246, DSM 20726, E. saccharolyticus, JCM 8734, LMG 11427, LMG:11427, NBRC 100493, NCDO 2594, NCIMB 702594, Streptococcus saccharolyticus
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