Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
OJG90807.1Lipoyltransferase and lipoate-protein ligase A. (334 aa)    
Predicted Functional Partners:
OJG90144.1
Hypothetical protein.
 
  
 0.951
OJG88279.1
Hypothetical protein.
  
  
 
0.906
OJG90806.1
Metallo-beta-lactamase.
  
    0.886
OJG89648.1
Dihydrolipoamide S-succinyltransferase.
 
 0.827
OJG89647.1
Dihydrolipoyl dehydrogenase.
 
  
 0.812
OJG86487.1
Glycine cleavage H-protein.
 
 
 0.786
OJG87394.1
Hypothetical protein.
 
 
 0.747
OJG90805.1
M42 glutamyl aminopeptidase.
  
    0.628
OJG90808.1
Hypothetical protein.
  
    0.597
OJG89649.1
Pyruvate dehydrogenase E1 component subunit beta.
 
  
 0.556
Your Current Organism:
Enterococcus saccharolyticus
NCBI taxonomy Id: 41997
Other names: ATCC 43076, CCUG 27643, CCUG 33311, CIP 103246, DSM 20726, E. saccharolyticus, JCM 8734, LMG 11427, LMG:11427, NBRC 100493, NCDO 2594, NCIMB 702594, Streptococcus saccharolyticus
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