Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OJG90098.1Hypothetical protein. (217 aa)    
Predicted Functional Partners:
OJG90099.1
Hypothetical protein.
 
 
 0.984
OJG88880.1
Hypothetical protein.
 
 
 0.844
OJG90891.1
Hypothetical protein.
  
 
 0.778
OJG87455.1
Two-component system sensor histidine kinase.
 
 
 0.775
OJG85669.1
Hypothetical protein.
 
 
 0.755
OJG87511.1
Hypothetical protein.
  
 
 0.739
OJG90100.1
Hypothetical protein.
  
    0.692
OJG90101.1
Hypothetical protein.
       0.682
OJG91205.1
Histidine kinase.
  
 
 0.681
OJG87411.1
Hypothetical protein.
 
 
 0.676
Your Current Organism:
Enterococcus saccharolyticus
NCBI taxonomy Id: 41997
Other names: ATCC 43076, CCUG 27643, CCUG 33311, CIP 103246, DSM 20726, E. saccharolyticus, JCM 8734, LMG 11427, LMG:11427, NBRC 100493, NCDO 2594, NCIMB 702594, Streptococcus saccharolyticus
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